Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854361.1_cds_XP_016512516.1_25150
CDS Infomation

[gene=LOC107829585] [db_xref=GeneID:107829585] [protein=WD repeat-containing protein 70] [protein_id=XP_016512516.1] [location=join(57759..58313,59197..59409,59512..59712,60438..60545,60643..60780,60873..61124,61425..61745,62672..62839)] [gbkey=CDS]
Sequence

ATGGCCGACGAAGCAGAGATTTACGACGGAATTAGGGCAGAGTTCCCATTATCTTTCGGC
AAGCAAGCTAAATCTCAGGCCCCTCTCGAACTCGTTCACAACGCCACTCGCCGGACCACC
GCCGCCGCTGATGGTAAACACGAACCATCTTCGTCAAAAATTGAGGCGAAACCTTTCCCT
TCTCTCTCTTCCTCCTCTAAATCCTGGCTTAATTCCCTCAAAAACCCTAAACCTAATTCA
AAGATTATCGGGCCGGGCCGTCCTCCATTGGGCTTGGGCTCGAGCGATGTCAAGGAAGAG
GAGGAGGGTGCTATGATTGGTCTGCCTCGGCCTGCAGGTGATGCGAAGACTGAGGAAGAT
GAGGATGGTGAAATGATTGGGCCTCCACGACCGCCGGTAGAAGAAGAGGATGAGCTGATG
ATTGGGCCACCAGCCCCGCCGCCATTTGGTTCGATGGGGTCGGATTCGGAGGATGATATG
GAAGAAGAAAAAGAAGAACATAATCAGTATCGAATACCTTTGAGTAATGAAATTATATTG
AAAGGCCATACAAAGGTTGTTGCTGCTCTTGCTGTGGATCCCTCAGGATCAAGGGTTCTC
TCTGGTAGCTACGACTATACTGTTCGGATGTATGACTTTCAAGGAATGAATGCTCGTTTA
CAGTCGTTTAGACAGCTGGAACCATCTGAAGGGCATCAAGTTCGTAGTTTGAGCTGGAGT
CCAACCGCAGACCGATTTTTATGTGTTACTGGGTCAGCCCAAGCTAAGATCTACGATCGT
GATGGACTTACACTCGGGGAATTTGTTAGAGGAGATATGTATATACATGATCTTAAGAAT
ACAAAAGGTCATATATCTGGATTGACATGTGGAGAATGGCACCCCAAAACAAAGGAGACA
ATTTTAACATCGTCAGAGGATGGTTCGTTGCGCCTATGGGATGTCAATGACTTTAAGAGT
CAAAAGCAGGTTATTAAACCAAAACTTGCTCGGCCTGGGAGAGTTCCTGTAATGACATGT
GCTTGGGACCGGGAAGGAAAAAGAATTGCAGGTGGTGTAGGAGATGGTTCTATACAGATA
TGGAATCTTAAGCCTGGATGGGGAAGCAGGCCAGACATATATGTAGCAAATGCTCACTCA
GATGATATTACAGGAGTCAAGTTCTCAAGTGATGGGCGGATACTCTTGTCAAGAAGTTTT
GATGGTTCCTTAAAGGTTTGGGATTTACGCCAGATGAAAGAACCCTTGCGAGTATTCGAT
GATCTCCCAAATAATTATGCTCAAACTAACATTGCGTTTAGTCCTGATGAACAACTGTTT
TTAACTGGGACATCTGTTGAAAAAGATGGGACTACTGGAGGAATGCTGTGCTTCTTTGAT
CGAGGAAAGCTAGAGCTAGTGTCAAGAGTTGGAATATCTCCTACTTACAGTGTTGTGCAG
TGTGCCTGGCACCCTAGGCTGAATCAGGTCTTTGCGACAGTTGGGGATAAACATGAAGGT
GGAACACACATTCTATATGATCCAACACTGAGTAAAAGAGGAGCACTAGTTTGTGTTGCT
CGTGCACCCAGGAAAAAGTCTGTGGATGATTTCCAGGCAGAGCCAGTTATTCATAATCCA
CATGCATTACCCTTATTTAGAGATCAACCTAGCCGCAAGCGTCAGCGAGAGAAAGCATTG
AAGGATCCACTGAAGTCTCATAAACCTGAGCAGCCAATAACAGGGCCAGGTTTTGGTGGT
AGAGTTGGTTCGACGAAGGGAAGCTTGTTGACGCAATACCTTCTTAAGCAAGGTGGCTTG
ATAAAGGAGACTTGGATGGAGGAAGATCCTAGAGAAGCAATCTTGAAGCATGCTGATGCG
GCTGCGAAAGATCCAAAATTTATTGCTCCAGCATATGCTGATACACAGCCTCAGCCACTC
TTTGCGGAGCCAGATGCTGAAGAAGAAGATAAGTGA

Peptide Sequence

PEP ID

XP_016512516.1
PEP Infomation

PREDICTED: WD repeat-containing protein 70 [Nicotiana tabacum]
Sequence

MADEAEIYDGIRAEFPLSFGKQAKSQAPLELVHNATRRTTAAADGKHEPSSSKIEAKPFP
SLSSSSKSWLNSLKNPKPNSKIIGPGRPPLGLGSSDVKEEEEGAMIGLPRPAGDAKTEED
EDGEMIGPPRPPVEEEDELMIGPPAPPPFGSMGSDSEDDMEEEKEEHNQYRIPLSNEIIL
KGHTKVVAALAVDPSGSRVLSGSYDYTVRMYDFQGMNARLQSFRQLEPSEGHQVRSLSWS
PTADRFLCVTGSAQAKIYDRDGLTLGEFVRGDMYIHDLKNTKGHISGLTCGEWHPKTKET
ILTSSEDGSLRLWDVNDFKSQKQVIKPKLARPGRVPVMTCAWDREGKRIAGGVGDGSIQI
WNLKPGWGSRPDIYVANAHSDDITGVKFSSDGRILLSRSFDGSLKVWDLRQMKEPLRVFD
DLPNNYAQTNIAFSPDEQLFLTGTSVEKDGTTGGMLCFFDRGKLELVSRVGISPTYSVVQ
CAWHPRLNQVFATVGDKHEGGTHILYDPTLSKRGALVCVARAPRKKSVDDFQAEPVIHNP
HALPLFRDQPSRKRQREKALKDPLKSHKPEQPITGPGFGGRVGSTKGSLLTQYLLKQGGL
IKETWMEEDPREAILKHADAAAKDPKFIAPAYADTQPQPLFAEPDAEEEDK

Transcript Sequence

Gene sequence data has not been registered.